miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|268182378|gb|GT363320.1|GT363320 GGGGAACATTTCGCAGGAAACAATACAATAAAGTTAAAAAATTGCTTATTATTTATTTACCTTCTCATGTAGATGCTACG
TCAACTTTAGCACAAAGAATTGTACAAGTCTGCATTTTTACGTAAAGCGCGATATAAAAGTTCAGTCCTCCTTTTCATGT
GGACCTATTTTAGATTGAACATCAATTAATATTAACTTATAGATCTGGCTAACACATAGAGGTCCCCTATGGATATAGCT
GCACATGAAGCCAACATTAGCTGCATTTCCCTGAACTTGCAAGGCACTCGATTGGCTACTGCTAGTGAAAAAGGGACTTT
GATTCGAATTTTTGATTCAGCATCTGGTGAAAAACTTCATGAACTTCGTAGAGGTGCACATCAAGCAAATATCTACTGTA
TAAATTTCAACAGTTCATCCACGCTTCTTTGTGTGTCCTCTGATCATGGCACGATTCACATTTTTGCCCTCGCCGACTTG
AAGCCGAATAAACAGTCAAGTTTAGCGAATACCATGTTCTTGCCCAAGTATTTTTCGTCCACGTGGTCTTTCTGCAAGTT
TACTGTTCCAAGTGGACCTCCTTGCATATGTGCCTTTGGACAAGATAACAATTCTATTATTGTTGTTTGTGCTGATGGTT
CATACTACAAATTTGCCTTCAATTTTAAAGGCGAATGCGTGAGAGAACATTGTGCTCAATTTTTGGAATTAACAGGTGAT
AATTTGTAATTGGGGGATACTAATGATTGAAGTGAATATATTTTGCTCTTTCCAAAAAAAAAAAAAAAA




Most similar to sp|Q9CR39|WIPI3_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9CR39|WIPI3_MOUSE WD repeat_field domain phosphoinositide-interacting
           protein 3 OS=Mus musculus GN=Wdr45l PE=2 SV=2
          Length = 344

 Score =  264 bits (674), Expect = 6e-70
 Identities = 124/177 (70%), Positives = 147/177 (83%)
 Frame = +1

Query: 196 LIDLANT*RSPMDIAAHEANISCISLNLQGTRLATASEKGTLIRIFDSASGEKLHELRRG 375
           L+DLA+T + P+DI AHE  +SCI+LNLQGTR+ATASEKGTLIRIFD++SG  + ELRRG
Sbjct: 168 LVDLASTEKPPVDIPAHEGVLSCIALNLQGTRIATASEKGTLIRIFDTSSGHLIQELRRG 227

Query: 376 AHQANIYCINFNSSSTLLCVSSDHGTIHIFALADLKPNKQSSLANTMFLPKYFSSTWSFC 555
           +  ANIYCINFN  ++L+CVSSDHGT+HIFA  D K NKQSSLA+  FLPKYFSS WSF 
Sbjct: 228 SQAANIYCINFNQDASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFS 287

Query: 556 KFTVPSGPPCICAFGQDNNSIIVVCADGSYYKFAFNFKGECVREHCAQFLELTGDNL 726
           KF VPSG PCICAFG + N++I +CADGSYYKF F+ KGECVR+ CAQFLE+T D L
Sbjct: 288 KFQVPSGSPCICAFGTEPNAVIAICADGSYYKFLFSPKGECVRDVCAQFLEMTDDKL 344